First Arc: War Aftermath
Marvel Character: Spiderman. Venom. Rogue. Susan. Wolverine. Hulk. Magneto.
Second Arc: Juubi Infection
Marvel Character: Mister Sinister. Madelyne Pryor. Beyonder. Ben Grimm (Thing), Lizard,
Boruto Character: Ryu
Third Arc: Genesis of Division
Marvel Characters: Apocalypse, Iceman, Quicksilver, Storm, Namor. Miss Marvel. Sym
Boruto: Ishiki
Forth Arc: Sanctuary of the Sage
Boruto character: Momoshiki. Kinshiki. Urashiki
Fifth Arc: The Moon's Final Testament (Toneri Arc)
Marvel Characters: Doom
Boruto Character: Toneri
Sixth Arc: The Maze of Rest
Two Year Time Skip
Seventh Arc: The Trial of Immortals
Marvel characters: Thor, Hela, Odin, Zeus, Ra, Gaea, Sentry, Ares
Eighth Arc: Uzumaki War (Pheonix Arc)
Marvel: Jean Grey
Ninth Arc: Dark Dimension Arc
Marvel: Ilyana Rasputin, Belasco
10th Arc: Eternal Rivals of the Divine Corpse (Shibai Otsutsuki Arc)
11th Arc: The Hand That Reached Through Death